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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs34351439 chr6:25833010 T/C 8.33E-5 508 37.77 29.5 4.1 KM Plot
KIRC rs34368056 chr2:67581910 C/G 2.23E-7 506 37.37 37.73 2.03 KM Plot
KIRC rs34391493 chr6:26022648 A/C 1.27E-9 493 37.6 36.95 3.37 KM Plot
KIRC rs34418651 chr2:67670602 T/C 2.22E-7 505 37.37 37.7 2.03 KM Plot
KIRC rs34438599 chr19:56148495 A/AT 1.79E-7 489 37.77 35.43 6.02 KM Plot
KIRC rs34493710 chr2:67633886 C/G 2.2E-7 507 37.33 37.7 2.03 KM Plot
KIRC rs34509945 chr2:67582228 ATTTT/A 2.23E-7 506 37.37 37.73 2.03 KM Plot
KIRC rs34523942 chr3:48342669 C/T 0.000133 494 37.9 36.93 19.13 KM Plot
KIRC rs34547630 chr2:67611678 A/C 2.09E-7 508 37.33 37.77 2.03 KM Plot
KIRC rs34589064 chr3:48339549 G/A 4.08E-5 505 37.6 37.77 21.12 KM Plot
KIRC rs34630841 chr3:48343261 G/A 7.28E-6 502 37.6 37.77 19.13 KM Plot
KIRC rs34636997 chr2:67617997 T/A 2.01E-7 506 37.33 37.77 2.03 KM Plot
KIRC rs34642816 chr11:125401154 C/T 7.02E-6 505 37.33 37.53 1.43 KM Plot
KIRC rs34644650 chr3:48346955 GCAAT/G 7.7E-6 504 37.6 37.77 19.13 KM Plot
KIRC rs34665783 chr4:169170208 G/A 2.18E-8 508 37.33 38.45 3.1 KM Plot